A · A1 · A1b · A1b1 · BT · CT · CF · F · K · K2 · P · R · R1 · R1a · R1a1 · R1a1a · R1a1a1 · R1a-Z93 · R1a-Z94 · R1a-M780 · R1a-F2935 · R1a-Y8 · R1a-Y9

Haplogroup R1a-Y9

Macro-haplogroup
R
Parent clade
R1a-Y8
Formed (estimate)
c. 2,800 - 3,200 years before present
TMRCA (estimate)
c. 1,600 - 2,100 years ago

Overview

R1a-Y9 is a major branch under R1a-Y8 and represents a paternal lineage strongly concentrated in the Himalayan arc and the mountainous regions of northern Pakistan and northern India. Its formation corresponds to periods of significant human movement through the Indus and Himalayan corridors, where Indo-Aryan populations integrated with or displaced earlier high-altitude communities. Y9 lineages reveal deep continuity among groups inhabiting areas such as Kashmir, Gilgit-Baltistan, Himachal Pradesh and Nepal. Many downstream branches show patterns consistent with ancient isolation, suggesting minimal admixture and strong long-term settlement stability. In several communities, Y9 forms an essential component of traditional clan structures. Y9 also appears in lower frequencies across the northern Indo-Gangetic plains, reflecting historical interactions between highland and lowland populations. Its distribution reflects a mixture of ancient Indo-Aryan expansions and later medieval migrations along the Himalayan foothills.

Geographic distribution

Y9 is most common in Kashmir, Gilgit-Baltistan, northern Pakistan, Himachal Pradesh and Nepal. Smaller frequencies appear in Punjab, Uttar Pradesh and Uttarakhand.

Ancient DNA

  • Himalayan archaeological contexts show Y9-like paternal signals.
  • Iron Age Swat Valley individuals reveal upstream Y8 structure ancestral to Y9.
  • Medieval mountain communities exhibit subclades derived from Y9.
  • Sites associated with Dardic-speaking groups align closely with Y9 diversification.

Phylogeny & subclades

Y9 includes several high-altitude microclusters and regional Himalayan branches.

  • Himalayan mountain clusters
  • Northern Pakistan microbranches

Notes & context

Y9 is fundamental for reconstructing the demographic history of Himalayan and trans-Himalayan populations.