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Haplogroup R1a-Y1059

Macro-haplogroup
R
Parent clade
R1a-Z94
Formed (estimate)
c. 3400 - 3800 years before present
TMRCA (estimate)
c. 1800 - 2100 years ago

Overview

Haplogroup R1a-Y1059 is a rare but historically informative downstream branch of R1a-Z94. It emerges during the early Iron Age, a period when Indo Iranian communities were beginning to diverge into the Iranian and Indo Aryan cultural spheres. The geographic and phylogenetic evidence suggests that Y1059 was part of populations living along the mountainous corridors of the Hindu Kush and the upper Indus basin. The relatively shallow internal branching of Y1059 indicates a population that maintained cohesion within small, stable communities. These groups likely engaged in agro pastoral lifestyles and controlled key ecological zones that linked highland and lowland regions. Such frontier environments played a major role in shaping early Indo Aryan and later Dardic population structures. Today, Y1059 is most frequently identified in northern Pakistan and parts of Afghanistan, particularly in regions historically connected to early Indo Aryan expansions, including the Swat Valley and adjacent cultural centers. Its limited wider diffusion suggests that the lineage remained geographically anchored rather than spreading through large scale migrations.

Geographic distribution

Northern Pakistan, eastern Afghanistan, with minor presence in northwest India.

Ancient DNA

  • Iron Age Swat Valley individuals fall near upstream branches related to Y1059.
  • Bronze Age steppe ancestry components align with the broader Z94 background of this lineage.

Phylogeny & subclades

A minor but geographically revealing branch under Z94 with strong ties to early Indo Aryan populations.

  • R1a-Y1059*

Notes & context

Essential for reconstructing early Indo Aryan genetic layers in the Hindu Kush region.