A · A1 · A1b · AA1b1 · BT · CT · CF · F · K · K2 · P · R · R1 · R1a · R1a1 · R1a1a · R1a1a1 · R1a-Z93 · R1a-Z94 · R1a-L657 · R1a-CTS6

Haplogroup R1a-CTS6

Macro-haplogroup
R
Parent clade
R1a-L657
Formed (estimate)
c. 3,400 - 3,900 years before present
TMRCA (estimate)
c. 2,400 - 2,900 years ago

Overview

R1a-CTS6 is one of the most significant downstream branches of R1a-L657 and represents a core paternal lineage of Indo-Aryan populations in the Indian subcontinent. Its emergence dates to the early Iron Age, during a period of linguistic diversification and the formation of regional Indo-Aryan societies. Archaeological correlations place CTS6-bearing populations in northern India and Pakistan, where they contributed to early Vedic and post-Vedic cultural traditions. CTS6 underwent extensive diversification during the early historic and medieval periods. Many of its subbranches correspond to regional expansions into the Indo-Gangetic plains, the Himalayan foothills, Punjab and northwestern India. Founder effects within specific caste, clan and tribal communities are evident across multiple downstream clades. The lineage forms a major paternal backbone for numerous Indo-Aryan speaking populations and provides high-resolution insight into ancient demographic structures across northern South Asia.

Geographic distribution

CTS6 is most frequent in northern India and Pakistan, including Punjab, Haryana, Uttar Pradesh and Kashmir. It is also common among Nepali and Himachali groups. Moderate levels appear across Afghanistan and Iran due to historical Indo-Iranian interactions.

Ancient DNA

  • Iron Age Swat and Gandhara individuals show ancestry consistent with upstream CTS6 structure.
  • Early Indo-Aryan archaeological contexts align with CTS6 demographic patterns.
  • Medieval northern Indian individuals show deep CTS6 derived lineages.
  • Himalayan proto-historic burials reveal continuity with CTS6 expansions.

Phylogeny & subclades

CTS6 contains multiple macroclusters including Y7, Y6 and several regional branches.

  • R1a-Y7
  • R1a-Y6
  • Regional Indo-Gangetic clusters

Notes & context

CTS6 is indispensable for reconstructing Indo-Aryan expansions and caste-related demographic structure in northern South Asia.